Simulation data for: Simulation of crystal growth by an innovative hybrid DFT-continuum solvation approach: Kink-site formation on barite (001) (ICPSR doi:10.26165/JUELICH-DATA/7H8VDF)

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Document Description

Citation

Title:

Simulation data for: Simulation of crystal growth by an innovative hybrid DFT-continuum solvation approach: Kink-site formation on barite (001)

Identification Number:

doi:10.26165/JUELICH-DATA/7H8VDF

Distributor:

Jülich DATA

Date of Distribution:

2023-07-03

Version:

2

Bibliographic Citation:

Rudin, Stefan; Kowalski, Piotr; Klinkenberg, Martina; Bornhake, Thomas; Bosbach, Dirk; Brandt, Felix, 2023, "Simulation data for: Simulation of crystal growth by an innovative hybrid DFT-continuum solvation approach: Kink-site formation on barite (001)", https://doi.org/10.26165/JUELICH-DATA/7H8VDF, Jülich DATA, V2

Study Description

Citation

Title:

Simulation data for: Simulation of crystal growth by an innovative hybrid DFT-continuum solvation approach: Kink-site formation on barite (001)

Identification Number:

doi:10.26165/JUELICH-DATA/7H8VDF

Authoring Entity:

Rudin, Stefan (Institute of Energy and Climate Research (IEK-6) – Nuclear Waste Management, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany)

Kowalski, Piotr (Institute of Energy and Climate Research (IEK-13) –, Theory and Computation of Energy Materials, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany)

Klinkenberg, Martina (Institute of Energy and Climate Research (IEK-6) – Nuclear Waste Management, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany)

Bornhake, Thomas (Institute of Energy and Climate Research (IEK-13) –, Theory and Computation of Energy Materials, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany)

Bosbach, Dirk (Institute of Energy and Climate Research (IEK-6) – Nuclear Waste Management, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany)

Brandt, Felix (Institute of Energy and Climate Research (IEK-6) – Nuclear Waste Management, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany)

Grant Number:

02NUK056B

Distributor:

Jülich DATA

Access Authority:

Rudin, Stefan

Depositor:

Rudin, Stefan

Date of Deposit:

2023-06-22

Study Scope

Keywords:

Earth and Environmental Sciences

Abstract:

The ability of a hybrid density functional theory (DFT)-continuum solvation approach was tested to simulate processes relevant to sorption and crystal growth at the solid-water interface with the highest possible accuracy. The focus was on studying the nucleation of Ba2+ kinks at the (001) surface, which is relevant to barite growth. This dataset contains the relaxed structures including their final energy of all simulations performed to test and verify the method.

Methodology and Processing

Sources Statement

Data Access

Other Study Description Materials

Other Study-Related Materials

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001-10_layers-SSCS.txt

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Simulation data of the relaxation of the barite (001) surface, 10 Ba-layers slab with implicit water.

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001-10-layers-vac.txt

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Simulation data of the relaxation of the barite (001) surface, 10 Ba-layers slab in vacuum.

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001-SSCS.txt

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Simulation data of the relaxation of the barite (001) surface with implicit water.

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001.txt

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Simulation data of the relaxation of the barite (001) surface in vacuum.

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010-SSCS.txt

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Simulation data of the relaxation of the barite (010) surface with implicit water.

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010.txt

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Simulation data of the relaxation of the barite (010) surface in vacuum.

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011-SSCS.txt

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Simulation data of the relaxation of the barite (011) surface with implicit water.

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011.txt

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Simulation data of the relaxation of the barite (011) surface in vacuum.

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012-SSCS.txt

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Simulation data of the relaxation of the barite (012) surface with implicit water.

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012.txt

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Simulation data of the relaxation of the barite (012) surface in vacuum.

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100-SSCS.txt

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Simulation data of the relaxation of the barite (100) surface with implicit water.

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100.txt

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Simulation data of the relaxation of the barite (100) surface in vacuum.

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101-SSCS.txt

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Simulation data of the relaxation of the barite (101) surface with implicit water.

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101.txt

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Simulation data of the relaxation of the barite (101) surface in vacuum.

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201-SSCS.txt

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Simulation data of the relaxation of the barite (201) surface with implicit water.

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201.txt

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Simulation data of the relaxation of the barite (201) surface in vacuum.

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210-5_layers-SSCS.txt

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Simulation data of the relaxation of the barite (210) surface, 5 Ba-layers slab with implicit water.

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210-5_layers-vacuum.txt

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Simulation data of the relaxation of the barite (210) surface, 5 Ba-layers slab in vacuum.

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210-8-layers-SSCS.txt

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Simulation data of the relaxation of the barite (210) surface, 8 Ba-layers slab with implicit water.

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210-8_layers-vacuum.txt

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Simulation data of the relaxation of the barite (210) surface, 8 Ba-layers slab in vacuum.

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210-SSCS.txt

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Simulation data of the relaxation of the barite (210) surface with implicit water.

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210.txt

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Simulation data of the relaxation of the barite (210) surface in vacuum.

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211-SSCS.txt

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Simulation data of the relaxation of the barite (211) surface with implicit water.

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211.txt

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Simulation data of the relaxation of the barite (211) surface in vacuum.

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acute-high.txt

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Simulation data of the Ba2+-inner-sphere complex configuration at the high position of the acute [120] step on the (001) surface with implicit water.

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acute-low.txt

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Simulation data of the Ba2+-inner-sphere complex configuration at the low position of the acute [120] step on the (001) surface with implicit water.

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Ba2+-Attachment-path-alpha-1-255-Movie.xyz

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Simulation of the Ba2+ attachment to the stepped barite (001) surface with implicit water, alpha = 1.255: complete Ba2+ attachment process as a sequence of the simulated intermediate structures.

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chemical/x-xyz

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Ba2+-Attachment-path-alpha-1-255-Part-1.txt

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Simulation of the Ba2+ attachment to the stepped barite (001) surface with implicit water, alpha = 1.255, Part 1: Completely dissolved Ba2+ ion – inner-sphere complex.

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Ba2+-attachment-path-alpha-1-255-Part-2.txt

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Simulation of the Ba2+ attachment to the stepped barite (001) surface with implicit water, alpha = 1.255, Part 2: inner-sphere complex – complete attachment of the Ba2+ ion.

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Ba2+-attachment-path-alpha-1-27-alternate-Movie.xyz

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Simulation of the Ba2+ attachment to the stepped barite (001) surface with implicit water, alpha = 1.27: alternative path of Ba2+ attachment from the completely dissolved Ba2+ ion to the inner-sphere complex as a sequence of the simulated intermediate structures.

Notes:

chemical/x-xyz

Other Study-Related Materials

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Ba2+-attachment-path-alpha-1-27-alternate.txt

Text:

Simulation of the Ba2+ attachment to the stepped barite (001) surface with implicit water, alpha = 1.27, alternative path from Completely dissolved Ba2+ ion to the inner-sphere complex.

Notes:

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Other Study-Related Materials

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Ba2+-attachment-path-alpha-1-27-Movie.xyz

Text:

Simulation of the Ba2+ attachment to the stepped barite (001) surface with implicit water, alpha = 1.27: complete Ba2+ attachment process as a sequence of the simulated intermediate structures.

Notes:

chemical/x-xyz

Other Study-Related Materials

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Ba2+-attachment-path-alpha-1-27-Part-1.txt

Text:

Simulation of the Ba2+ attachment to the stepped barite (001) surface with implicit water, alpha = 1.27, Part 1: Completely dissolved Ba2+ ion – inner-sphere complex.

Notes:

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Other Study-Related Materials

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Ba2+-attachment-path-alpha-1-27-Part-2.txt

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Simulation of the Ba2+ attachment to the stepped barite (001) surface with implicit water, alpha = 1.27, Part 2: inner-sphere complex – complete attachment of the Ba2+ ion.

Notes:

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Bidentate-Filling_threshold_8-25D-1-not-converged-INPUT-polarization_density.cube

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Simulation data of the hydrated barite surface and the hydration of Ba2+ ions of the bidentate structure with two bonds to two sulfates, filling-threshold = 8.25D-1, input-structure - not converged.

Notes:

application/octet-stream

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Bidentate-Filling_threshold_8-25D-1-not-converged-INPUT.txt

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Simulation data of the Ba2+-bidentate structure with two bonds to two sulfates with implicit water, filling-threshold = 8.25D-1, input-structure - not converged.

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Bidentate-Filling_threshold_9-5D-1-polarization_density.cube

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Simulation data of the hydrated barite surface and the hydration of Ba2+ ions of the bidentate structure with two bonds to two sulfates, filling-threshold = 9.5D-1.

Notes:

application/octet-stream

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Bidentate-Filling_threshold_9-5D-1.txt

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Simulation data of the Ba2+-bidentate structure with two bonds to two sulfates with implicit water, filling-threshold = 9.5D-1.

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Bidentate-SSCS_and_explicit_water-not-completely-converged.txt

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Simulation data of bidentate structure with two bonds to two sulfates – the first hydration shell of the attaching Ba2+ simulated with explicit water, other water simulated implicitly, filling-threshold = 8.25D-1 – not fully converged.

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LDA-200-444.txt

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Simulation data of the barite unit cell relaxation with Exchange-correlation functional: LDA, Cutoff energy (ecutwfc): 200, k-points: 444

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obtuse-high.txt

Text:

Simulation data of the Ba2+-inner-sphere complex configuration at the high position of the obtuse [120] step on the (001) surface with implicit water.

Notes:

text/plain

Other Study-Related Materials

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obtuse-low.txt

Text:

Simulation data of the Ba2+-inner-sphere complex configuration at the low position of the obtuse [120] step on the (001) surface with implicit water.

Notes:

text/plain

Other Study-Related Materials

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pbe-200-444.txt

Text:

Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbe, Cutoff energy (ecutwfc): 200, k-points: 444

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Other Study-Related Materials

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pbe-50-334.txt

Text:

Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbe, Cutoff energy (ecutwfc): 50, k-points: 334

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Other Study-Related Materials

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pbesol-100-444.txt

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Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc): 100, k-points: 444

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pbesol-200-222.txt

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Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc): 200, k-points: 222

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Other Study-Related Materials

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pbesol-200-333.txt

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Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc): 200, k-points: 333

Notes:

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Other Study-Related Materials

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pbesol-200-444.txt

Text:

Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc): 200, k-points: 444

Notes:

text/plain

Other Study-Related Materials

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pbesol-200-666.txt

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Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc): 200, k-points: 666

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Other Study-Related Materials

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pbesol-20-444.txt

Text:

Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc): 20, k-points: 444

Notes:

text/plain

Other Study-Related Materials

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pbesol-400-444.txt

Text:

Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc): 400, k-points: 444

Notes:

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Other Study-Related Materials

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pbesol-50-334.txt

Text:

Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc): 50, k-points: 334

Notes:

text/plain

Other Study-Related Materials

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pbesol-50-444.txt

Text:

Simulation data of the barite unit cell relaxation with Exchange-correlation functional: pbesol, Cutoff energy (ecutwfc):50, k-points: 444

Notes:

text/plain

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read_me-1.txt

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