{"@context":"http://schema.org","@type":"Dataset","@id":"https://doi.org/10.26165/JUELICH-DATA/SOJ6SQ","identifier":"https://doi.org/10.26165/JUELICH-DATA/SOJ6SQ","name":"Dataset of GrowScreen-Rhizo 3 shoot image analysis including trained U-Net CNN","creator":[{"name":"Constantin Eiteneuer","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0003-3170-3561","identifier":"https://orcid.org/0000-0003-3170-3561"},{"name":"Laura Verena Junker-Frohn","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0002-0655-6232","identifier":"https://orcid.org/0000-0002-0655-6232"},{"name":"Henning Lenz","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0002-8080-0328","identifier":"https://orcid.org/0000-0002-8080-0328"},{"name":"Mark Müller-Linow","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0002-6722-5437","identifier":"https://orcid.org/0000-0002-6722-5437"},{"name":"Kerstin A. Nagel","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0003-3025-0388","identifier":"https://orcid.org/0000-0003-3025-0388"}],"author":[{"name":"Constantin Eiteneuer","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0003-3170-3561","identifier":"https://orcid.org/0000-0003-3170-3561"},{"name":"Laura Verena Junker-Frohn","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0002-0655-6232","identifier":"https://orcid.org/0000-0002-0655-6232"},{"name":"Henning Lenz","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0002-8080-0328","identifier":"https://orcid.org/0000-0002-8080-0328"},{"name":"Mark Müller-Linow","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0002-6722-5437","identifier":"https://orcid.org/0000-0002-6722-5437"},{"name":"Kerstin A. Nagel","affiliation":"Forschungszentrum Juelich - IBG-2","@id":"https://orcid.org/0000-0003-3025-0388","identifier":"https://orcid.org/0000-0003-3025-0388"}],"datePublished":"2026-08-14","dateModified":"2026-08-14","version":"1","description":["The publication contains 1800 RGB images generated using the high throughput plant phenotyping platform GrowScreen-Rhizo 3. Shoots of barley, maize, and sunflower plants differing in plant developmental stages, with a maximum age of 3-4 weeks, were imaged by 6 cameras from 3 different view points (top view, 45°, side view) during multiple rhizotron experiments (for details, see Junker-Frohn et al., 2026). 600 images each for barley, maize, and sunflower plants and their corresponding manually annotated masks were split 5:1 for model evaluation and validation purposes. The pytorch U-Net implementation that was trained on the data for inference is included in this publication. Furthermore the publication contains 696 RGB images, imaged with the GrowScreen-Rhizo3 platform, and their corresponding measured leaf area and plant height. This data was used to train a Gaussian Process Regression model to predict leaf area. The trained model for inference is included in this publication."],"keywords":["Agricultural Sciences","Computer and Information Science","shoot phenotyping","non-invasive"],"citation":[{"@type":"CreativeWork","text":"Laura Verena Junker-Frohn, Henning Lenz, Shiyan Jia, Alexander Putz, Jens Wilhelm, Constantin Eiteneuer, Sascha Adels, Olaf Mück, Anna Galinski, Jonas Lentz, Fabio Fiorani, Mark Müller-Linow, Kerstin A. Nagel, GrowScreen-Rhizo 3 - automated large-scale high throughput greenhouse phenotyping of plant root and shoot development, Plant Phenomics, 2026, 100213, ISSN 2643-6515","@id":"https://doi.org/10.1016/j.plaphe.2026.100213","identifier":"https://doi.org/10.1016/j.plaphe.2026.100213"}],"license":{"@type":"Dataset"},"includedInDataCatalog":{"@type":"DataCatalog","name":"Jülich DATA","url":"https://data.fz-juelich.de"},"publisher":{"@type":"Organization","name":"Jülich DATA"},"provider":{"@type":"Organization","name":"Jülich DATA"},"distribution":[{"@type":"DataDownload","name":"README.txt","fileFormat":"text/plain","contentSize":5067,"contentUrl":"https://data.fz-juelich.de/api/access/datafile/52801"}]}